Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | EQ825_22455 | Not Available | Negative | 4591824 - 4595438 | 127853.0 |
| conjugal transfer protein trah | EQ825_22460 | Not Available | Negative | 4595451 - 4596884 | 51262.9 |
| conjugal transfer protein traf | EQ825_22465 | Not Available | Negative | 4596886 - 4597926 | 39025.4 |
| atp-dependent helicase | EQ825_22470 | Not Available | Negative | 4598037 - 4599548 | 57416.7 |
| hypothetical protein | EQ825_22475 | Not Available | Negative | 4599557 - 4599835 | 10808.9 |
| dna-binding protein | EQ825_22480 | Not Available | Negative | 4599835 - 4600875 | 38436.2 |
| dna replication terminus site-binding protein | EQ825_22485 | Not Available | Negative | 4601028 - 4601903 | 32856.6 |
| hypothetical protein | EQ825_22490 | Not Available | Negative | 4602230 - 4602721 | 18133.4 |
| 3'-5' exonuclease | EQ825_22495 | Not Available | Negative | 4602718 - 4603587 | 31855.2 |
| integrase | EQ825_22500 | Not Available | Negative | 4603592 - 4604602 | 37695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





