Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_22405 | Not Available | Negative | 4585632 - 4585919 | 10116.3 |
| hypothetical protein | EQ825_22410 | Not Available | Negative | 4585924 - 4586490 | 21935.9 |
| parm/stba family protein | EQ825_22415 | Not Available | Positive | 4586962 - 4587945 | 35707.0 |
| hypothetical protein | EQ825_22420 | Not Available | Positive | 4587962 - 4588255 | 10795.7 |
| dna-binding protein | EQ825_22425 | Not Available | Positive | 4588257 - 4588676 | 16202.3 |
| regulator | EQ825_22430 | Not Available | Negative | 4588736 - 4589287 | 20624.0 |
| transcriptional regulator | EQ825_22435 | Not Available | Negative | 4589284 - 4589892 | 22812.0 |
| lytic transglycosylase domain-containing protein | EQ825_22440 | Not Available | Negative | 4589903 - 4590436 | 19354.0 |
| nucleotide excision repair protein | EQ825_22445 | Not Available | Negative | 4590436 - 4590708 | 10517.7 |
| permease | EQ825_22450 | Not Available | Positive | 4591424 - 4591786 | 13361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





