Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_22255 | Not Available | Negative | 4569277 - 4569747 | 17558.9 |
| hypothetical protein | EQ825_22260 | Not Available | Negative | 4569740 - 4570111 | 13336.7 |
| hypothetical protein | EQ825_22265 | Not Available | Negative | 4570119 - 4570313 | 7075.57 |
| hypothetical protein | EQ825_22270 | Not Available | Negative | 4570313 - 4570564 | 9128.01 |
| transcriptional regulator | EQ825_22275 | Not Available | Negative | 4570654 - 4571202 | 20674.9 |
| diaminopimelate decarboxylase | EQ825_22280 | Not Available | Positive | 4571365 - 4571715 | 13328.9 |
| helix-turn-helix domain-containing protein | EQ825_22285 | Not Available | Positive | 4571720 - 4572022 | 11007.4 |
| chromosome segregation protein parm | EQ825_22290 | Not Available | Negative | 4572050 - 4572343 | 10998.2 |
| hu family dna-binding protein | EQ825_22295 | Not Available | Negative | 4572432 - 4572704 | 9354.21 |
| nuclease | EQ825_22300 | Not Available | Negative | 4572762 - 4573289 | 19812.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





