Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbj | EQ825_21950 | Not Available | Negative | 4530770 - 4531111 | 12587.5 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | EQ825_21955 | Not Available | Negative | 4531041 - 4531586 | 19719.8 |
| type-f conjugative transfer system pilin chaperone traq | EQ825_21960 | Not Available | Negative | 4531573 - 4531857 | 10866.4 |
| toxin arta | EQ825_21965 | Not Available | Positive | 4531938 - 4532252 | 12157.2 |
| conjugal transfer protein trba | EQ825_21970 | Not Available | Negative | 4532254 - 4532601 | 12945.4 |
| type-f conjugative transfer system pilin assembly protein traf | EQ825_21975 | Not Available | Negative | 4532617 - 4533360 | 27974.6 |
| conjugal transfer protein trbe | EQ825_21980 | Not Available | Negative | 4533353 - 4533610 | 9779.94 |
| type-f conjugative transfer system mating-pair stabilization protein tran | EQ825_21985 | Not Available | Negative | 4533637 - 4535445 | 65558.0 |
| type-f conjugative transfer system pilin assembly protein trbc | EQ825_21990 | Not Available | Negative | 4535442 - 4536080 | 23434.3 |
| conjugal transfer protein trau | EQ825_21995 | Not Available | Negative | 4536089 - 4537081 | 36822.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





