Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_21595 | Not Available | Positive | 4473771 - 4474142 | 13629.4 |
| flagellar biosynthesis protein flip | EQ825_21600 | Not Available | Positive | 4474139 - 4474891 | 27172.9 |
| flagellar type iii secretion system protein fliq | EQ825_21605 | Not Available | Positive | 4474894 - 4475166 | 9684.52 |
| flagellar biosynthetic protein flir | EQ825_21610 | Not Available | Positive | 4475168 - 4475950 | 28677.3 |
| flagellar type iii secretion system protein flhb | EQ825_21615 | Not Available | Positive | 4475940 - 4477079 | 42765.7 |
| flagellar biosynthesis protein flha | EQ825_21620 | Not Available | Positive | 4477063 - 4479156 | 75694.6 |
| transposase | EQ825_21625 | Not Available | Negative | 4479349 - 4479846 | 19997.8 |
| peptidoglycan endopeptidase | EQ825_21630 | Not Available | Negative | 4480022 - 4480771 | 28781.3 |
| type ii toxin-antitoxin system antitoxin dinj | EQ825_21635 | Not Available | Positive | 4480981 - 4481241 | 9334.27 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | EQ825_21640 | Not Available | Positive | 4481244 - 4481522 | 10831.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





