Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | EQ825_21170 | Not Available | Negative | 4385843 - 4389367 | 128843.0 |
| duf333 domain-containing protein | EQ825_21175 | Not Available | Positive | 4389641 - 4389907 | 8650.36 |
| heat shock protein hslj | EQ825_21180 | Not Available | Negative | 4389904 - 4390326 | 15166.5 |
| d-lactate dehydrogenase | EQ825_21185 | Not Available | Negative | 4390437 - 4391426 | 36522.8 |
| ydbh family protein | EQ825_21190 | Not Available | Positive | 4391634 - 4394273 | 96852.2 |
| ynbe family lipoprotein | EQ825_21195 | Not Available | Positive | 4394270 - 4394455 | 6815.51 |
| duf1318 domain-containing protein | EQ825_21200 | Not Available | Positive | 4394463 - 4394786 | 11742.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | EQ825_21215 | Not Available | Positive | 4398629 - 4401088 | 85506.9 |
| aldo/keto reductase family oxidoreductase | EQ825_21220 | Not Available | Positive | 4401308 - 4402168 | 30754.9 |
| duf2773 domain-containing bactofilin | EQ825_21225 | Not Available | Positive | 4402232 - 4404538 | 86597.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





