Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter assembly complex protein tama | EQ825_20990 | Not Available | Negative | 4348724 - 4350457 | 64799.7 |
| peptide-methionine (s)-s-oxide reductase msra | EQ825_20995 | Not Available | Positive | 4350663 - 4351301 | 23316.3 |
| hlyc/corc family transporter | EQ825_21000 | Not Available | Positive | 4351624 - 4352967 | 49765.6 |
| duf1107 domain-containing protein | EQ825_21005 | Not Available | Negative | 4353046 - 4353252 | 8072.24 |
| ytfj family protein | EQ825_21010 | Not Available | Positive | 4353577 - 4354131 | 20464.7 |
| hypothetical protein | EQ825_21015 | Not Available | Negative | 4354221 - 4355132 | 34768.3 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | EQ825_21020 | Not Available | Negative | 4355344 - 4356084 | 27191.4 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | EQ825_21025 | Not Available | Positive | 4356274 - 4358217 | 70863.0 |
| transcriptional regulator | EQ825_21030 | Not Available | Negative | 4358335 - 4358715 | 14094.0 |
| sdr family oxidoreductase | EQ825_21035 | Not Available | Positive | 4358804 - 4359664 | 29855.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





