Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grxa family glutaredoxin | EQ825_20675 | Not Available | Positive | 4278171 - 4278428 | 9695.39 |
| hypothetical protein | EQ825_20680 | Not Available | Negative | 4278458 - 4278835 | 14204.0 |
| transporter | EQ825_20685 | Not Available | Positive | 4279105 - 4280790 | 60355.1 |
| serine acetyltransferase | EQ825_20690 | Not Available | Positive | 4281123 - 4281674 | 20766.7 |
| tetr/acrr family transcriptional regulator | EQ825_20695 | Not Available | Negative | 4281734 - 4282270 | 20339.6 |
| mfs transporter | EQ825_20700 | Not Available | Positive | 4282354 - 4283562 | 41841.0 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase | EQ825_20705 | Not Available | Positive | 4283562 - 4284374 | 30093.8 |
| hypothetical protein | EQ825_20710 | Not Available | Positive | 4284462 - 4284746 | 10005.2 |
| multidrug efflux mfs transporter mdfa | EQ825_20715 | Not Available | Negative | 4284787 - 4286019 | 44337.8 |
| undecaprenyl-diphosphate phosphatase | EQ825_20720 | Not Available | Positive | 4286304 - 4286900 | 22371.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





