Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | EQ825_20465 | Not Available | Positive | 4236630 - 4236848 | 8250.1 |
| Trna-ser | Not Available | Not Available | Positive | 4237102 - 4237189 | Not Available |
| atp-dependent clp protease atp-binding subunit clpa | EQ825_20480 | Not Available | Negative | 4237594 - 4239870 | 84211.9 |
| atp-dependent clp protease adapter clps | EQ825_20485 | Not Available | Negative | 4239901 - 4240221 | 12179.7 |
| cold shock-like protein cspd | EQ825_20490 | Not Available | Positive | 4240544 - 4240768 | 7969.41 |
| macrolide abc transporter atp-binding protein/permease macb | EQ825_20495 | Not Available | Negative | 4240841 - 4242787 | 70620.8 |
| maca family efflux pump subunit | EQ825_20500 | Not Available | Negative | 4242784 - 4243899 | 40628.3 |
| duf535 domain-containing protein | EQ825_20505 | Not Available | Positive | 4244014 - 4245006 | 38277.7 |
| atp-dependent endonuclease | EQ825_20510 | Not Available | Negative | 4245003 - 4246661 | 63530.9 |
| aquaporin z | EQ825_20515 | Not Available | Positive | 4247087 - 4247782 | 23703.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





