Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro dipeptidase | EQ825_19585 | Not Available | Positive | 4065874 - 4067205 | 50088.8 |
| impact family protein | EQ825_19590 | Not Available | Positive | 4067205 - 4067819 | 21758.1 |
| trk system potassium transporter trkh | EQ825_19595 | Not Available | Positive | 4067858 - 4069309 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | EQ825_19600 | Not Available | Positive | 4069321 - 4069866 | 21257.5 |
| hypothetical protein | EQ825_19610 | Not Available | Negative | 4073223 - 4073948 | 27085.6 |
| hypothetical protein | EQ825_19615 | Not Available | Negative | 4074062 - 4074463 | 15141.2 |
| permease | EQ825_19620 | Not Available | Negative | 4074683 - 4074922 | 8499.83 |
| hypothetical protein | EQ825_19625 | Not Available | Negative | 4074995 - 4075273 | 10115.2 |
| dna primase | EQ825_19630 | Not Available | Negative | 4075260 - 4076987 | 64684.3 |
| hypothetical protein | EQ825_19635 | Not Available | Negative | 4077165 - 4077551 | 13982.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





