Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis regulatory protein kinase ubib | EQ825_19535 | Not Available | Positive | 4055128 - 4056768 | 63206.4 |
| twin-arginine translocase subunit tata | EQ825_19540 | Not Available | Positive | 4056847 - 4057116 | 9663.52 |
| sec-independent protein translocase subunit tatb | EQ825_19545 | Not Available | Positive | 4057120 - 4057635 | 18421.8 |
| sec-independent protein translocase subunit tatc | EQ825_19550 | Not Available | Positive | 4057638 - 4058414 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | EQ825_19555 | Not Available | Positive | 4058456 - 4059238 | 29047.6 |
| transcription/translation regulatory transformer protein rfah | EQ825_19560 | Not Available | Negative | 4059235 - 4059723 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | EQ825_19565 | Not Available | Positive | 4059890 - 4061383 | 55606.8 |
| nad(p)h-flavin reductase | EQ825_19570 | Not Available | Positive | 4061429 - 4062130 | 26243.5 |
| acetyl-coa c-acyltransferase fada | EQ825_19575 | Not Available | Negative | 4062322 - 4063485 | 40952.7 |
| fatty acid oxidation complex subunit alpha fadb | EQ825_19580 | Not Available | Negative | 4063495 - 4065684 | 79568.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





