Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_00545 | Not Available | Negative | 103890 - 104000 | 4207.46 |
| duf1398 domain-containing protein | EQ825_00550 | Not Available | Negative | 104053 - 104457 | 15828.0 |
| helix-turn-helix-type transcriptional regulator | EQ825_00555 | Not Available | Negative | 104678 - 105409 | 28222.1 |
| blue light-responsive regulator bluf | EQ825_00560 | Not Available | Negative | 105614 - 106825 | 45332.5 |
| two-component-system connector protein ycgz | EQ825_00565 | Not Available | Positive | 107139 - 107375 | 8720.46 |
| two-component-system connector protein ymga | EQ825_00570 | Not Available | Positive | 107418 - 107690 | 10287.5 |
| two-component-system connector protein arir | EQ825_00575 | Not Available | Positive | 107719 - 107985 | 9710.59 |
| hypothetical protein | EQ825_00580 | Not Available | Positive | 108098 - 108346 | 9701.79 |
| cyclic diguanylate phosphodiesterase | EQ825_00585 | Not Available | Positive | 108682 - 110205 | 56828.0 |
| hypothetical protein | EQ825_00590 | Not Available | Positive | 110337 - 110555 | 8228.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





