Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide antibiotic transporter sbma | EQ825_18140 | Not Available | Negative | 3760279 - 3761478 | 45694.1 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | EQ825_18145 | Not Available | Positive | 3761830 - 3762987 | 41851.5 |
| hydrogen peroxide resistance inhibitor ipra | EQ825_18150 | Not Available | Negative | 3762988 - 3763611 | 23957.1 |
| autotransporter outer membrane beta-barrel domain-containing protein | EQ825_18155 | Not Available | Negative | 3763699 - 3765399 | 60452.7 |
| electron transport complex subunit rsxb | EQ825_18165 | Not Available | Negative | 3767641 - 3768219 | 20544.9 |
| electron transport complex subunit rsxa | EQ825_18170 | Not Available | Negative | 3768219 - 3768800 | 20898.8 |
| duf2569 domain-containing protein | EQ825_18175 | Not Available | Negative | 3768877 - 3769317 | 16351.5 |
| transcription modulator ydgt | EQ825_18180 | Not Available | Negative | 3769403 - 3769618 | 8417.05 |
| division septum protein blr | EQ825_18185 | Not Available | Negative | 3769891 - 3770016 | 4600.64 |
| oxidoreductase | EQ825_18190 | Not Available | Positive | 3770259 - 3771299 | 38217.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





