Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase arol | EQ825_18085 | Not Available | Negative | 3751188 - 3751712 | 19079.8 |
| yaii/yqxd family protein | EQ825_18090 | Not Available | Negative | 3751895 - 3752353 | 16970.4 |
| pyrroline-5-carboxylate reductase | EQ825_18095 | Not Available | Positive | 3752473 - 3753282 | 28146.6 |
| diguanylate cyclase adra | EQ825_18100 | Not Available | Negative | 3753299 - 3754414 | 41410.8 |
| phosphate starvation-inducible protein psif | EQ825_18105 | Not Available | Negative | 3754516 - 3754836 | 11687.2 |
| alkaline phosphatase | EQ825_18110 | Not Available | Negative | 3754955 - 3756370 | 49427.3 |
| anti-adapter protein irap | EQ825_18115 | Not Available | Negative | 3756471 - 3756731 | 9938.05 |
| d-alanine--d-alanine ligase a | EQ825_18120 | Not Available | Positive | 3757194 - 3758288 | 39318.0 |
| duf2754 domain-containing protein | EQ825_18125 | Not Available | Negative | 3758312 - 3758524 | 8097.92 |
| duf2755 family protein | EQ825_18130 | Not Available | Positive | 3758784 - 3759092 | 11425.2 |
Pathways
570 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





