Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase phoq | EQ825_00500 | Not Available | Negative | 94875 - 96335 | 55332.9 |
| two-component system response regulator phop | EQ825_00505 | Not Available | Negative | 96335 - 97006 | 25536.7 |
| adenylosuccinate lyase | EQ825_00510 | Not Available | Negative | 97174 - 98544 | 51556.7 |
| lysogenization regulator hfld | EQ825_00515 | Not Available | Negative | 98548 - 99189 | 22949.0 |
| trna 2-thiouridine(34) synthase mnma | EQ825_00520 | Not Available | Negative | 99225 - 100331 | 40955.7 |
| nudix hydrolase | EQ825_00525 | Not Available | Negative | 100385 - 100846 | 17433.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 101048 - 101163 | Not Available |
| 23s rrna pseudouridine(2457) synthase rlue | EQ825_00530 | Not Available | Negative | 100856 - 101509 | 24881.8 |
| nadp-dependent isocitrate dehydrogenase | EQ825_00535 | Not Available | Positive | 101681 - 102931 | 45772.4 |
| anti-adapter protein iram | EQ825_00540 | Not Available | Negative | 103034 - 103357 | 12122.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





