Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate response regulator transcription factor phob | EQ825_18030 | Not Available | Negative | 3738085 - 3738774 | 26435.0 |
| exonuclease subunit sbcd | EQ825_18035 | Not Available | Positive | 3738964 - 3740166 | 44730.1 |
| exonuclease subunit sbcc | EQ825_18040 | Not Available | Positive | 3740163 - 3743306 | 118418.0 |
| mfs transporter araj | EQ825_18045 | Not Available | Positive | 3743432 - 3744616 | 41985.1 |
| fructokinase | EQ825_18050 | Not Available | Negative | 3744759 - 3745667 | 32511.6 |
| recombination-associated protein rdgc | EQ825_18055 | Not Available | Positive | 3745792 - 3746703 | 33995.3 |
| duf2773 domain-containing protein | EQ825_18065 | Not Available | Negative | 3747233 - 3749512 | 86744.6 |
| pyrimidine/purine nucleoside phosphorylase | EQ825_18070 | Not Available | Negative | 3749656 - 3749940 | 10234.9 |
| arom family protein | EQ825_18075 | Not Available | Negative | 3750012 - 3750689 | 24900.4 |
| protein yaia | EQ825_18080 | Not Available | Negative | 3750947 - 3751138 | 7281.55 |
Pathways
858 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





