Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | EQ825_17980 | Not Available | Negative | 3724834 - 3726681 | 66636.3 |
| preprotein translocase subunit yajc | EQ825_17985 | Not Available | Negative | 3726709 - 3727041 | 11887.9 |
| trna guanosine(34) transglycosylase tgt | EQ825_17990 | Not Available | Negative | 3727064 - 3728191 | 42596.1 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | EQ825_17995 | Not Available | Negative | 3728246 - 3729316 | 39433.0 |
| acp phosphodiesterase | EQ825_18000 | Not Available | Positive | 3729409 - 3729990 | 22918.3 |
| hypothetical protein | EQ825_18005 | Not Available | Negative | 3730011 - 3731396 | 53040.9 |
| maltodextrin glucosidase | EQ825_18010 | Not Available | Negative | 3731584 - 3733401 | 69289.1 |
| proline-specific permease proy | EQ825_18015 | Not Available | Negative | 3733557 - 3734930 | 50218.8 |
| branched-chain amino acid transporter carrier protein brnq | EQ825_18020 | Not Available | Negative | 3735006 - 3736325 | 46241.6 |
| phosphate regulon sensor histidine kinase phor | EQ825_18025 | Not Available | Negative | 3736732 - 3738027 | 49645.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





