Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphatase a | EQ825_17930 | Not Available | Negative | 3717363 - 3717878 | 19332.2 |
| thiamine-phosphate kinase | EQ825_17935 | Not Available | Negative | 3717856 - 3718833 | 35002.8 |
| transcription antitermination factor nusb | EQ825_17940 | Not Available | Negative | 3718911 - 3719330 | 15673.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | EQ825_17945 | Not Available | Negative | 3719350 - 3719820 | 16157.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EQ825_17950 | Not Available | Negative | 3719909 - 3721012 | 40378.7 |
| transcriptional regulator nrdr | EQ825_17955 | Not Available | Negative | 3721016 - 3721465 | 17229.9 |
| duf3251 domain-containing protein | EQ825_17960 | Not Available | Positive | 3721616 - 3722155 | 19649.6 |
| nucleoside-specific channel-forming protein tsx | EQ825_17965 | Not Available | Positive | 3722454 - 3723338 | 33590.6 |
| hnh nuclease family protein | EQ825_17970 | Not Available | Negative | 3723376 - 3723723 | 13364.7 |
| protein translocase subunit secf | EQ825_17975 | Not Available | Negative | 3723852 - 3724823 | 35384.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





