Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EQ825_17880 | Not Available | Positive | 3706004 - 3707368 | 48782.9 |
| yajq family cyclic di-gmp-binding protein | EQ825_17885 | Not Available | Negative | 3707496 - 3707987 | 18344.9 |
| 2-dehydropantoate 2-reductase | EQ825_17890 | Not Available | Positive | 3708155 - 3709066 | 33872.8 |
| protein deglycase yajl | EQ825_17895 | Not Available | Positive | 3709029 - 3709619 | 20867.3 |
| trna 4-thiouridine(8) synthase thii | EQ825_17900 | Not Available | Negative | 3709673 - 3711121 | 55051.4 |
| exodeoxyribonuclease vii small subunit | EQ825_17905 | Not Available | Positive | 3711327 - 3711569 | 8952.42 |
| (2e,6e)-farnesyl diphosphate synthase | EQ825_17910 | Not Available | Positive | 3711569 - 3712468 | 32161.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EQ825_17915 | Not Available | Positive | 3712493 - 3714355 | 67606.9 |
| 1-deoxyxylulose-5-phosphate synthase yajo | EQ825_17920 | Not Available | Positive | 3714410 - 3715384 | 36421.3 |
| pentapeptide repeat-containing protein | EQ825_17925 | Not Available | Positive | 3715615 - 3717186 | 60783.0 |
Pathways
860 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





