Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| streptothricin n-acetyltransferase | EQ825_17830 | Not Available | Negative | 3695369 - 3695992 | 23188.1 |
| trigger factor | EQ825_17835 | Not Available | Negative | 3696238 - 3697536 | 48181.3 |
| transcriptional regulator bola | EQ825_17840 | Not Available | Negative | 3697880 - 3698197 | 11994.3 |
| hypothetical protein | EQ825_17845 | Not Available | Positive | 3698502 - 3699080 | 20951.3 |
| muropeptide mfs transporter ampg | EQ825_17850 | Not Available | Positive | 3699124 - 3700599 | 53344.5 |
| cytochrome o ubiquinol oxidase subunit ii | EQ825_17855 | Not Available | Positive | 3701060 - 3702007 | 34971.2 |
| cytochrome o ubiquinol oxidase subunit i | EQ825_17860 | Not Available | Positive | 3702029 - 3704020 | 74328.1 |
| cytochrome o ubiquinol oxidase subunit iii | EQ825_17865 | Not Available | Positive | 3704010 - 3704624 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit iv | EQ825_17870 | Not Available | Positive | 3704624 - 3704953 | 12030.2 |
| protoheme ix farnesyltransferase | EQ825_17875 | Not Available | Positive | 3704965 - 3705855 | 32250.4 |
Pathways
896 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





