Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf454 family protein | EQ825_17675 | Not Available | Negative | 3661411 - 3661788 | 14771.0 |
| primosomal replication protein n'' | EQ825_17680 | Not Available | Positive | 3661858 - 3662385 | 20429.6 |
| duf2496 domain-containing protein | EQ825_17685 | Not Available | Positive | 3662399 - 3662560 | 6094.32 |
| mechanosensitive channel msck | EQ825_17690 | Not Available | Negative | 3662772 - 3666134 | 127240.0 |
| multidrug efflux transporter transcriptional repressor acrr | EQ825_17695 | Not Available | Negative | 3666262 - 3666909 | 24768.1 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acra | EQ825_17700 | Not Available | Positive | 3667051 - 3668244 | 42199.1 |
| multidrug efflux rnd transporter permease subunit | EQ825_17705 | Not Available | Positive | 3668267 - 3671416 | 113580.0 |
| hha toxicity modulator tomb | EQ825_17710 | Not Available | Positive | 3671962 - 3672336 | 14558.1 |
| hemolysin expression modulator hha | EQ825_17715 | Not Available | Positive | 3672362 - 3672580 | 8628.46 |
| maltose o-acetyltransferase | EQ825_17720 | Not Available | Positive | 3672751 - 3673302 | 20097.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





