Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 family protein | EQ825_17555 | Not Available | Negative | 3638727 - 3640157 | 52608.8 |
| thiol:disulfide interchange protein dsba | EQ825_17560 | Not Available | Negative | 3640312 - 3640938 | 23105.8 |
| serine/threonine protein kinase | EQ825_17565 | Not Available | Negative | 3640955 - 3641941 | 38145.5 |
| duf1040 family protein | EQ825_17570 | Not Available | Negative | 3642018 - 3642287 | 10273.5 |
| molybdenum cofactor guanylyltransferase moba | EQ825_17575 | Not Available | Positive | 3642357 - 3642941 | 21639.1 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | EQ825_17580 | Not Available | Positive | 3642923 - 3643450 | 19364.5 |
| hypothetical protein | EQ825_17605 | Not Available | Positive | 3644590 - 3645384 | 29844.2 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | EQ825_17610 | Not Available | Positive | 3645588 - 3646067 | 17093.9 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | EQ825_17615 | Not Available | Negative | 3646104 - 3647756 | 60829.4 |
| mfs transporter | EQ825_17620 | Not Available | Positive | 3647974 - 3649194 | 43308.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





