Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoquinovose isomerase | EQ825_17455 | Not Available | Positive | 3612750 - 3613991 | 47435.0 |
| aldose-1-epimerase | EQ825_17460 | Not Available | Positive | 3614105 - 3615031 | 34018.8 |
| alpha-glucosidase | EQ825_17465 | Not Available | Positive | 3615230 - 3617266 | 77264.9 |
| mfs transporter | EQ825_17470 | Not Available | Positive | 3617312 - 3618697 | 50985.1 |
| mfs transporter | EQ825_17475 | Not Available | Positive | 3618740 - 3620143 | 51519.0 |
| porin ompl | EQ825_17480 | Not Available | Positive | 3620211 - 3620903 | 27170.7 |
| mfs transporter | EQ825_17485 | Not Available | Negative | 3620994 - 3622259 | 46382.0 |
| hypothetical protein | EQ825_17490 | Not Available | Negative | 3622361 - 3623341 | 36943.9 |
| utra domain-containing protein | EQ825_17495 | Not Available | Negative | 3623349 - 3624059 | 26912.2 |
| translational gtpase typa | EQ825_17500 | Not Available | Negative | 3624276 - 3626099 | 67359.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





