Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth domain-containing protein | EQ825_17350 | Not Available | Positive | 3593071 - 3594819 | 66009.6 |
| duf3829 domain-containing protein | EQ825_17355 | Not Available | Negative | 3594921 - 3595976 | 39279.2 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EQ825_17360 | Not Available | Negative | 3596129 - 3596962 | 30562.9 |
| sulfate abc transporter substrate-binding protein | EQ825_17365 | Not Available | Positive | 3597156 - 3597743 | 21369.5 |
| formate dehydrogenase-n subunit alpha | EQ825_17370 | Not Available | Positive | 3597792 - 3600206 | 89574.2 |
| formate dehydrogenase subunit beta | EQ825_17375 | Not Available | Positive | 3600219 - 3601121 | 33102.1 |
| formate dehydrogenase cytochrome b556 subunit | EQ825_17380 | Not Available | Positive | 3601118 - 3601753 | 24650.7 |
| formate dehydrogenase accessory protein fdhe | EQ825_17385 | Not Available | Positive | 3601750 - 3602679 | 34690.5 |
| hypothetical protein | EQ825_17390 | Not Available | Negative | 3603009 - 3603251 | 9273.0 |
| copg family transcriptional regulator | EQ825_17395 | Not Available | Negative | 3603471 - 3603689 | 8571.42 |
Pathways
1142 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





