Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose/proton symporter rhat | EQ825_17300 | Not Available | Positive | 3582481 - 3583515 | 37286.1 |
| hth-type transcriptional activator rhar | EQ825_17305 | Not Available | Negative | 3583512 - 3584450 | 35670.4 |
| hth-type transcriptional activator rhas | EQ825_17310 | Not Available | Negative | 3584434 - 3585270 | 32248.1 |
| rhamnulokinase | EQ825_17315 | Not Available | Positive | 3585558 - 3587027 | 54154.4 |
| l-rhamnose isomerase | EQ825_17320 | Not Available | Positive | 3587024 - 3588283 | 47166.9 |
| rhamnulose-1-phosphate aldolase | EQ825_17325 | Not Available | Positive | 3588642 - 3589466 | 30128.2 |
| l-rhamnose mutarotase | EQ825_17330 | Not Available | Positive | 3589476 - 3589790 | 12235.4 |
| pts fructose transporter subunit iia | EQ825_17335 | Not Available | Positive | 3590103 - 3590549 | 16186.6 |
| pts fructose-like transporter subunit iibc | EQ825_17340 | Not Available | Positive | 3590560 - 3592011 | 51123.5 |
| aminopeptidase | EQ825_17345 | Not Available | Positive | 3592001 - 3593071 | 38756.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





