Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1454 family protein | EQ825_17025 | Not Available | Positive | 3537212 - 3537811 | 21736.1 |
| triose-phosphate isomerase | EQ825_17030 | Not Available | Positive | 3537919 - 3538686 | 26973.3 |
| cdp-diacylglycerol diphosphatase | EQ825_17035 | Not Available | Negative | 3538741 - 3539496 | 28374.2 |
| sulfate abc transporter substrate-binding protein | EQ825_17040 | Not Available | Negative | 3539603 - 3540592 | 36661.2 |
| 6-phosphofructokinase | EQ825_17045 | Not Available | Negative | 3540912 - 3541874 | 34728.1 |
| cation-efflux pump fief | EQ825_17050 | Not Available | Negative | 3542055 - 3542957 | 32929.2 |
| envelope stress sensor histidine kinase cpxa | EQ825_17280 | Not Available | Positive | 3578031 - 3579404 | 51643.3 |
| 6-n-hydroxylaminopurine resistance protein | EQ825_17285 | Not Available | Negative | 3579510 - 3580184 | 25344.1 |
| 2-keto-3-deoxygluconate permease | EQ825_17290 | Not Available | Negative | 3580333 - 3581316 | 33671.4 |
| superoxide dismutase | EQ825_17295 | Not Available | Negative | 3581576 - 3582196 | 23080.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





