Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 3519976 - 3520051 | Not Available |
| type iv secretion protein rhs | EQ825_16930 | Not Available | Negative | 3520391 - 3520508 | 3905.67 |
| 50s ribosomal protein l31 | EQ825_16935 | Not Available | Negative | 3520668 - 3520880 | 7871.49 |
| primosomal protein n' | EQ825_16940 | Not Available | Positive | 3521083 - 3523281 | 81577.5 |
| dna-binding transcriptional regulator cytr | EQ825_16945 | Not Available | Positive | 3523437 - 3524462 | 37822.1 |
| cell division protein ftsn | EQ825_16950 | Not Available | Positive | 3524554 - 3525513 | 35839.3 |
| atp-dependent protease subunit hslv | EQ825_16955 | Not Available | Positive | 3525606 - 3526136 | 19094.0 |
| hslu--hslv peptidase atpase subunit | EQ825_16960 | Not Available | Positive | 3526146 - 3527477 | 49596.7 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | EQ825_16965 | Not Available | Positive | 3527544 - 3528470 | 33582.0 |
| ribonuclease e activity regulator rraa | EQ825_16970 | Not Available | Positive | 3528563 - 3529048 | 17361.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





