Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-hydroxybenzoic acid efflux pump subunit aaea | EQ825_16760 | Not Available | Negative | 3484868 - 3485800 | 34776.5 |
| duf1656 domain-containing protein | EQ825_16765 | Not Available | Negative | 3485808 - 3486011 | 7847.01 |
| hth-type transcriptional activator aaer | EQ825_16770 | Not Available | Positive | 3486194 - 3487123 | 34518.1 |
| metalloprotease tldd | EQ825_16775 | Not Available | Negative | 3487251 - 3488696 | 51277.1 |
| asma2 domain-containing protein | EQ825_16780 | Not Available | Negative | 3488852 - 3492652 | 138975.0 |
| ribonuclease g | EQ825_16785 | Not Available | Negative | 3492720 - 3494189 | 55367.4 |
| septum formation inhibitor maf | EQ825_16790 | Not Available | Negative | 3494179 - 3494772 | 21430.6 |
| rod shape-determining protein mred | EQ825_16795 | Not Available | Negative | 3494781 - 3495269 | 18788.9 |
| rod shape-determining protein mrec | EQ825_16800 | Not Available | Negative | 3495269 - 3496372 | 39562.8 |
| rod shape-determining protein | EQ825_16805 | Not Available | Negative | 3496438 - 3497481 | 36954.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





