Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | EQ825_16660 | Not Available | Negative | 3466150 - 3467025 | 29637.7 |
| n-acetylmannosamine-6-phosphate 2-epimerase | EQ825_16665 | Not Available | Negative | 3467022 - 3467711 | 24190.3 |
| mfs transporter | EQ825_16670 | Not Available | Negative | 3467759 - 3469249 | 53584.4 |
| n-acetylneuraminate lyase | EQ825_16675 | Not Available | Negative | 3469358 - 3470251 | 32623.5 |
| transcriptional regulator nanr | EQ825_16680 | Not Available | Negative | 3470373 - 3471164 | 29496.0 |
| c4-dicarboxylate transporter dcuc | EQ825_16685 | Not Available | Positive | 3471544 - 3472911 | 48892.1 |
| clpxp protease specificity-enhancing factor | EQ825_16690 | Not Available | Negative | 3472953 - 3473450 | 18233.4 |
| stringent starvation protein a | EQ825_16695 | Not Available | Negative | 3473456 - 3474094 | 24302.3 |
| hypothetical protein | EQ825_16700 | Not Available | Positive | 3474350 - 3474571 | 8377.01 |
| 30s ribosomal protein s9 | EQ825_16705 | Not Available | Negative | 3474489 - 3474881 | 14857.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





