Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts phosphocarrier protein npr | EQ825_16610 | Not Available | Positive | 3451668 - 3451940 | 9810.71 |
| phop regulatory network protein yrbl | EQ825_16615 | Not Available | Positive | 3452154 - 3452786 | 24373.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EQ825_16620 | Not Available | Negative | 3452783 - 3453511 | 27343.1 |
| isoprenoid biosynthesis protein elbb | EQ825_16625 | Not Available | Negative | 3453508 - 3454161 | 23052.0 |
| aerobic respiration two-component sensor histidine kinase arcb | EQ825_16630 | Not Available | Negative | 3454391 - 3456727 | 87988.0 |
| tigr01212 family radical sam protein | EQ825_16635 | Not Available | Negative | 3456823 - 3457752 | 34608.6 |
| glutamate synthase large subunit | EQ825_16640 | Not Available | Positive | 3458427 - 3462887 | 163320.0 |
| glutamate synthase small subunit | EQ825_16645 | Not Available | Positive | 3462900 - 3464318 | 52045.3 |
| duf1016 domain-containing protein | EQ825_16650 | Not Available | Positive | 3464502 - 3465629 | 43455.1 |
| yhch/yjgk/yial family protein | EQ825_16655 | Not Available | Negative | 3465689 - 3466153 | 17037.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





