Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | EQ825_16355 | Not Available | Negative | 3403977 - 3404480 | 18534.8 |
| scp2 domain-containing protein | EQ825_16360 | Not Available | Negative | 3404474 - 3404998 | 19673.0 |
| u32 family peptidase | EQ825_16365 | Not Available | Positive | 3405207 - 3406202 | 37049.2 |
| u32 family peptidase | EQ825_16370 | Not Available | Positive | 3406211 - 3407089 | 32539.1 |
| luciferase-like monooxygenase | EQ825_16375 | Not Available | Positive | 3407295 - 3408302 | 37131.5 |
| tryptophan permease | EQ825_16380 | Not Available | Negative | 3408420 - 3409664 | 44379.2 |
| dead/deah family atp-dependent rna helicase | EQ825_16385 | Not Available | Negative | 3409818 - 3411707 | 70565.5 |
| protein yrbn | EQ825_16390 | Not Available | Negative | 3411700 - 3411780 | 2979.59 |
| lipoprotein nlpi | EQ825_16395 | Not Available | Negative | 3411887 - 3412771 | 33622.5 |
| polyribonucleotide nucleotidyltransferase | EQ825_16400 | Not Available | Negative | 3412880 - 3415015 | 77106.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





