Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EQ825_16305 | Not Available | Negative | 3396197 - 3397057 | 31335.7 |
| penicillin-binding protein activator | EQ825_16310 | Not Available | Positive | 3397122 - 3399158 | 72803.2 |
| yran family protein | EQ825_16315 | Not Available | Positive | 3399116 - 3399511 | 14798.5 |
| dnaa initiator-associating protein diaa | EQ825_16320 | Not Available | Positive | 3399531 - 3400121 | 21107.3 |
| divisome-associated lipoprotein yrap | EQ825_16325 | Not Available | Positive | 3400131 - 3400706 | 20029.1 |
| permease | EQ825_16330 | Not Available | Negative | 3400820 - 3401860 | 37297.0 |
| nad-dependent epimerase/dehydratase family protein | EQ825_16335 | Not Available | Negative | 3401933 - 3402568 | 23197.3 |
| type 1 glutamine amidotransferase | EQ825_16340 | Not Available | Positive | 3402696 - 3403214 | 18886.5 |
| hypothetical protein | EQ825_16345 | Not Available | Negative | 3403194 - 3403637 | 16777.2 |
| dna damage response exodeoxyribonuclease yhbq | EQ825_16350 | Not Available | Positive | 3403688 - 3403990 | 11228.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





