Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EQ825_16250 | Not Available | Negative | 3383678 - 3384709 | 37370.5 |
| mfs transporter | EQ825_16255 | Not Available | Negative | 3384706 - 3386022 | 48365.0 |
| sensor histidine kinase | EQ825_16260 | Not Available | Negative | 3386095 - 3387636 | 57993.8 |
| response regulator transcription factor | EQ825_16265 | Not Available | Negative | 3387636 - 3388265 | 22813.6 |
| taurine abc transporter substrate-binding protein | EQ825_16270 | Not Available | Positive | 3388568 - 3389530 | 34296.0 |
| taurine abc transporter atp-binding subunit | EQ825_16275 | Not Available | Positive | 3389543 - 3390310 | 28329.5 |
| taurine abc transporter permease tauc | EQ825_16280 | Not Available | Positive | 3390307 - 3391134 | 29583.6 |
| taurine dioxygenase | EQ825_16285 | Not Available | Positive | 3391131 - 3391982 | 32402.3 |
| porphobilinogen synthase | EQ825_16290 | Not Available | Negative | 3392089 - 3393063 | 35626.8 |
| fimbrial protein | EQ825_16300 | Not Available | Positive | 3395063 - 3396154 | 38455.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





