Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | EQ825_16200 | Not Available | Positive | 3372446 - 3373255 | 28875.5 |
| acetaldehyde dehydrogenase (acetylating) | EQ825_16205 | Not Available | Positive | 3373252 - 3374202 | 33444.5 |
| 4-hydroxy-2-oxovalerate aldolase | EQ825_16210 | Not Available | Positive | 3374199 - 3375212 | 36440.6 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | EQ825_16215 | Not Available | Positive | 3375790 - 3377001 | 41585.5 |
| duf2058 domain-containing protein | EQ825_16220 | Not Available | Positive | 3377103 - 3377642 | 19939.9 |
| s-formylglutathione hydrolase | EQ825_16225 | Not Available | Negative | 3377968 - 3378801 | 31273.9 |
| s-(hydroxymethyl)glutathione dehydrogenase | EQ825_16230 | Not Available | Negative | 3378894 - 3380003 | 39335.2 |
| dna-binding transcriptional repressor frmr | EQ825_16235 | Not Available | Negative | 3380038 - 3380313 | 10318.3 |
| ferric abc transporter atp-binding protein | EQ825_16240 | Not Available | Negative | 3380473 - 3381519 | 39102.0 |
| iron abc transporter permease | EQ825_16245 | Not Available | Negative | 3381531 - 3383609 | 75696.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





