Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | EQ825_15940 | Not Available | Negative | 3309062 - 3310255 | 41797.3 |
| hypothetical protein | EQ825_15950 | Not Available | Negative | 3311401 - 3312162 | 28317.6 |
| luxr family transcriptional regulator | EQ825_15955 | Not Available | Negative | 3312316 - 3313110 | 29623.3 |
| dna recombinase | EQ825_15960 | Not Available | Negative | 3313441 - 3314004 | 21831.7 |
| choline dehydrogenase | EQ825_15970 | Not Available | Negative | 3315059 - 3316747 | 62567.9 |
| betaine-aldehyde dehydrogenase | EQ825_15975 | Not Available | Negative | 3316761 - 3318233 | 52932.2 |
| transcriptional regulator beti | EQ825_15980 | Not Available | Negative | 3318247 - 3318834 | 21800.4 |
| choline bcct transporter bett | EQ825_15985 | Not Available | Positive | 3318963 - 3320996 | 75871.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | EQ825_15990 | Not Available | Positive | 3321569 - 3325552 | 140832.0 |
| eal domain-containing protein | EQ825_15995 | Not Available | Positive | 3325694 - 3326782 | 40606.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





