Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EQ825_15890 | Not Available | Negative | 3299110 - 3299961 | 33614.3 |
| aldo/keto reductase | EQ825_15895 | Not Available | Positive | 3300209 - 3301078 | 32705.2 |
| duf417 domain-containing protein | EQ825_15900 | Not Available | Negative | 3301238 - 3301831 | 21886.7 |
| duf1471 domain-containing protein | EQ825_15905 | Not Available | Negative | 3301843 - 3302079 | 8442.19 |
| pyridine nucleotide-disulfide oxidoreductase | EQ825_15910 | Not Available | Negative | 3302188 - 3303513 | 48272.2 |
| arac family transcriptional regulator | EQ825_15915 | Not Available | Positive | 3303739 - 3304593 | 31565.4 |
| (fe-s)-binding protein | EQ825_15920 | Not Available | Positive | 3305122 - 3305841 | 26063.8 |
| iron-sulfur cluster-binding protein | EQ825_15925 | Not Available | Positive | 3305852 - 3307279 | 53026.9 |
| lactate utilization protein c | EQ825_15930 | Not Available | Positive | 3307272 - 3307967 | 25114.0 |
| hypothetical protein | EQ825_15935 | Not Available | Negative | 3308210 - 3308878 | 25547.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





