Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1440 domain-containing protein | EQ825_15790 | Not Available | Positive | 3277074 - 3277688 | 22982.1 |
| ykgj family cysteine cluster protein | EQ825_15795 | Not Available | Negative | 3277935 - 3278264 | 11829.1 |
| hypothetical protein | EQ825_15800 | Not Available | Negative | 3278577 - 3279287 | 26579.7 |
| fimbrial adhesin ecpd | EQ825_15805 | Not Available | Negative | 3279256 - 3280899 | 60024.1 |
| fimbrial biogenesis outer membrane usher protein | EQ825_15810 | Not Available | Negative | 3280889 - 3283414 | 91313.8 |
| fimbrial chaperone ecpb | EQ825_15815 | Not Available | Negative | 3283440 - 3284108 | 24484.4 |
| common pilus major fimbrillin subunit ecpa | EQ825_15820 | Not Available | Negative | 3284166 - 3284753 | 20094.5 |
| luxr family transcriptional regulator | EQ825_15825 | Not Available | Negative | 3284828 - 3285370 | 21231.8 |
| hypothetical protein | EQ825_15830 | Not Available | Positive | 3285842 - 3286045 | 7696.7 |
| hypothetical protein | EQ825_15835 | Not Available | Positive | 3286194 - 3286385 | 7297.65 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





