Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropyrimidinase | EQ825_15575 | Not Available | Negative | 3236576 - 3237961 | 51028.1 |
| ygey family selenium metabolism-linked hydrolase | EQ825_15580 | Not Available | Negative | 3238014 - 3239225 | 44806.4 |
| diaminopropionate ammonia-lyase | EQ825_15585 | Not Available | Negative | 3239283 - 3240479 | 43330.1 |
| knotted carbamoyltransferase ygew | EQ825_15590 | Not Available | Negative | 3240537 - 3241724 | 44058.7 |
| sigma-54-dependent transcriptional regulator | EQ825_15595 | Not Available | Positive | 3242203 - 3243981 | 66114.0 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | EQ825_15600 | Not Available | Negative | 3244021 - 3244500 | 16922.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | EQ825_15605 | Not Available | Negative | 3244497 - 3245375 | 31611.7 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | EQ825_15610 | Not Available | Negative | 3245386 - 3247683 | 82721.0 |
| lysm peptidoglycan-binding domain-containing protein | EQ825_15615 | Not Available | Positive | 3248099 - 3248854 | 26568.1 |
| Trna-gly | Not Available | Not Available | Positive | 3248933 - 3249006 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





