Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanine deaminase | EQ825_15525 | Not Available | Negative | 3220904 - 3222220 | 50101.8 |
| xanthine permease xanp | EQ825_15530 | Not Available | Negative | 3222238 - 3223638 | 49097.5 |
| molybdopterin-dependent oxidoreductase mo/fe-s-binding subunit | EQ825_15535 | Not Available | Negative | 3223803 - 3226673 | 103541.0 |
| molybdopterin-dependent oxidoreductase fad-binding subunit | EQ825_15540 | Not Available | Negative | 3226670 - 3227449 | 28651.2 |
| putative aminohydrolase ssna | EQ825_15545 | Not Available | Negative | 3227500 - 3228828 | 48843.2 |
| putative selenate reductase subunit ygfk | EQ825_15550 | Not Available | Negative | 3228831 - 3231929 | 115609.0 |
| molybdenum cofactor cytidylyltransferase | EQ825_15555 | Not Available | Negative | 3232251 - 3232829 | 21547.2 |
| putative selenium-dependent hydroxylase accessory protein yqec | EQ825_15560 | Not Available | Positive | 3232932 - 3233702 | 28279.3 |
| ef2563 family selenium-dependent molybdenum hydroxylase system protein | EQ825_15565 | Not Available | Positive | 3233750 - 3235375 | 57685.4 |
| carbamate kinase | EQ825_15570 | Not Available | Negative | 3235596 - 3236528 | 33087.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





