Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | EQ825_15475 | Not Available | Positive | 3209884 - 3211617 | 63392.7 |
| peptide chain release factor 2 | EQ825_15480 | Not Available | Positive | 3211708 - 3212806 | 41222.9 |
| lysine--trna ligase | EQ825_15485 | Not Available | Positive | 3212816 - 3214333 | 57606.8 |
| isopentenyl-diphosphate delta-isomerase | EQ825_15490 | Not Available | Negative | 3214376 - 3214924 | 20540.4 |
| hypothetical protein | EQ825_15495 | Not Available | Positive | 3214979 - 3215050 | 2617.29 |
| hypothetical protein | EQ825_15500 | Not Available | Negative | 3215047 - 3215172 | 4772.24 |
| purine permease | EQ825_15505 | Not Available | Negative | 3215174 - 3216622 | 51761.4 |
| oxidoreductase (fe-s)-binding subunit | EQ825_15510 | Not Available | Positive | 3217058 - 3218977 | 69074.9 |
| 4fe-4s dicluster domain-containing protein | EQ825_15515 | Not Available | Positive | 3218977 - 3219465 | 17530.4 |
| ncs2 family permease | EQ825_15520 | Not Available | Negative | 3219501 - 3220868 | 46742.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





