Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | EQ825_15315 | Not Available | Negative | 3181647 - 3182642 | 36692.1 |
| methylmalonyl-coa mutase | EQ825_15320 | Not Available | Negative | 3182635 - 3184779 | 77923.7 |
| lysr family transcriptional regulator argp | EQ825_15325 | Not Available | Negative | 3184983 - 3185876 | 33473.6 |
| iron reductase | EQ825_15330 | Not Available | Negative | 3185947 - 3187272 | 49841.9 |
| duf1471 domain-containing protein | EQ825_15335 | Not Available | Negative | 3187335 - 3187595 | 9599.34 |
| fmn-dependent nadh-azoreductase | EQ825_15340 | Not Available | Negative | 3187612 - 3188241 | 23000.7 |
| lysr family transcriptional regulator | EQ825_15345 | Not Available | Positive | 3188342 - 3189238 | 32836.9 |
| ribose-5-phosphate isomerase rpia | EQ825_15350 | Not Available | Positive | 3189294 - 3189953 | 22861.8 |
| phosphoglycerate dehydrogenase | EQ825_15355 | Not Available | Positive | 3190209 - 3191441 | 44136.3 |
| type i toxin-antitoxin system ibs family toxin | EQ825_15360 | Not Available | Positive | 3191670 - 3191729 | 2219.08 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





