Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biosynthetic arginine decarboxylase | EQ825_15215 | Not Available | Positive | 3158842 - 3160818 | 73853.7 |
| lipoprotein | EQ825_15220 | Not Available | Positive | 3160964 - 3161695 | 26360.7 |
| agmatinase | EQ825_15225 | Not Available | Positive | 3161831 - 3162751 | 33558.9 |
| metalloprotease | EQ825_15230 | Not Available | Negative | 3162957 - 3163715 | 26844.9 |
| transketolase | EQ825_15235 | Not Available | Positive | 3163993 - 3165984 | 72229.7 |
| pts mannitol transporter subunit iia | EQ825_15240 | Not Available | Positive | 3166298 - 3166741 | 16046.2 |
| pts mannitol transporter subunit iicb | EQ825_15245 | Not Available | Positive | 3166769 - 3168157 | 48974.1 |
| l-sorbose 1-phosphate reductase | EQ825_15250 | Not Available | Positive | 3168172 - 3169449 | 45949.3 |
| class ii fructose-bisphosphatase | EQ825_15255 | Not Available | Positive | 3169446 - 3170411 | 34322.5 |
| fumarase e | EQ825_15260 | Not Available | Positive | 3170433 - 3170942 | 19212.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





