Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2884 family protein | EQ825_15115 | Not Available | Positive | 3143196 - 3143915 | 26430.8 |
| l-asparaginase 2 | EQ825_15120 | Not Available | Positive | 3144091 - 3145137 | 36852.7 |
| duf1202 family protein | EQ825_15125 | Not Available | Positive | 3145254 - 3146261 | 38427.4 |
| radical sam family heme chaperone hemw | EQ825_15130 | Not Available | Negative | 3146330 - 3147466 | 42606.7 |
| xtp/ditp diphosphatase | EQ825_15135 | Not Available | Negative | 3147459 - 3148052 | 21012.0 |
| yggu family protein | EQ825_15140 | Not Available | Negative | 3148060 - 3148350 | 10429.8 |
| yggt family protein | EQ825_15145 | Not Available | Negative | 3148347 - 3148913 | 21168.5 |
| yggs family pyridoxal phosphate-dependent enzyme | EQ825_15150 | Not Available | Negative | 3148931 - 3149635 | 25788.9 |
| type iv pilus twitching motility protein pilt | EQ825_15155 | Not Available | Positive | 3149653 - 3150633 | 35844.2 |
| holliday junction resolvase ruvx | EQ825_15160 | Not Available | Negative | 3150824 - 3151240 | 15187.2 |
Pathways
826 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





