Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | EQ825_15015 | Not Available | Negative | 3120788 - 3122296 | 57978.7 |
| hypothetical protein | EQ825_15020 | Not Available | Positive | 3122605 - 3122976 | 13926.2 |
| hypothetical protein | EQ825_15025 | Not Available | Negative | 3122903 - 3123382 | 18265.2 |
| hypothetical protein | EQ825_15030 | Not Available | Negative | 3123382 - 3123708 | 12641.9 |
| hypothetical protein | EQ825_15035 | Not Available | Positive | 3124034 - 3124825 | 29835.7 |
| porin | EQ825_15040 | Not Available | Negative | 3125275 - 3126669 | 52555.3 |
| glycoside hydrolase family 32 protein | EQ825_15045 | Not Available | Negative | 3126864 - 3128294 | 54192.1 |
| mfs transporter | EQ825_15050 | Not Available | Negative | 3128294 - 3129571 | 46830.1 |
| alpha-galactosidase | EQ825_15055 | Not Available | Negative | 3129634 - 3131760 | 81171.0 |
| laci family dna-binding transcriptional regulator | EQ825_15060 | Not Available | Negative | 3131856 - 3132866 | 36699.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





