Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ825_14955 | Not Available | Negative | 3107619 - 3107816 | 7146.77 |
| duf4145 domain-containing protein | EQ825_14960 | Not Available | Positive | 3108100 - 3111513 | 131087.0 |
| sam-dependent dna methyltransferase | EQ825_14965 | Not Available | Positive | 3111577 - 3113211 | 61664.7 |
| restriction endonuclease | EQ825_14970 | Not Available | Positive | 3113220 - 3114365 | 42849.2 |
| hypothetical protein | EQ825_14975 | Not Available | Positive | 3114374 - 3115996 | 61736.8 |
| hypothetical protein | EQ825_14980 | Not Available | Positive | 3115996 - 3116892 | 34514.9 |
| hypothetical protein | EQ825_14990 | Not Available | Positive | 3117576 - 3117944 | 13914.7 |
| porin family protein | EQ825_14995 | Not Available | Positive | 3118162 - 3118908 | 27246.2 |
| papi protein | EQ825_15000 | Not Available | Negative | 3119052 - 3119189 | 5224.34 |
| is3 family transposase | EQ825_15005 | Not Available | Negative | 3119155 - 3120368 | 46255.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





