Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | EQ825_14690 | Not Available | Negative | 3048888 - 3049649 | 28791.4 |
| hypothetical protein | EQ825_14695 | Not Available | Positive | 3049782 - 3050192 | 15435.6 |
| abc transporter permease | EQ825_14700 | Not Available | Negative | 3050154 - 3051260 | 41641.3 |
| abc transporter permease | EQ825_14705 | Not Available | Negative | 3051271 - 3052404 | 42062.4 |
| abc transporter atp-binding protein | EQ825_14710 | Not Available | Negative | 3052397 - 3054133 | 63177.3 |
| secretion protein hlyd | EQ825_14715 | Not Available | Negative | 3054126 - 3055121 | 36287.7 |
| dna-binding transcriptional regulator cecr | EQ825_14720 | Not Available | Negative | 3055124 - 3055795 | 25018.1 |
| atp-dependent rna helicase rhle | EQ825_14725 | Not Available | Positive | 3056024 - 3057388 | 50008.5 |
| type iii effector | EQ825_14730 | Not Available | Positive | 3059483 - 3061495 | 76867.4 |
| atp-dependent dna helicase ding | EQ825_14735 | Not Available | Positive | 3061779 - 3063929 | 81435.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





