Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EQ825_14335 | Not Available | Positive | 2983290 - 2984195 | 34379.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EQ825_14340 | Not Available | Negative | 2984229 - 2984831 | 22387.7 |
| class i fumarate hydratase | EQ825_14345 | Not Available | Negative | 2984841 - 2986493 | 60046.6 |
| dicarboxylate/amino acid:cation symporter | EQ825_14350 | Not Available | Negative | 2986601 - 2987881 | 45236.0 |
| duf4387 domain-containing protein | EQ825_14355 | Not Available | Negative | 2988042 - 2988359 | 11912.4 |
| acyclic terpene utilization atua family protein | EQ825_14360 | Not Available | Negative | 2988356 - 2989726 | 49157.7 |
| methylaspartate ammonia-lyase | EQ825_14365 | Not Available | Negative | 2989730 - 2990971 | 45584.7 |
| methylaspartate mutase subunit e | EQ825_14370 | Not Available | Negative | 2990971 - 2992416 | 53137.7 |
| glutamate mutase | EQ825_14375 | Not Available | Negative | 2992435 - 2993823 | 50479.4 |
| methylaspartate mutase subunit s | EQ825_14380 | Not Available | Negative | 2993823 - 2994272 | 16444.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





