Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative allantoin permease | EQ825_14125 | Not Available | Negative | 2939859 - 2941313 | 52415.2 |
| 2-hydroxy-3-oxopropionate reductase | EQ825_14130 | Not Available | Negative | 2941482 - 2942360 | 30799.5 |
| hydroxypyruvate isomerase | EQ825_14135 | Not Available | Negative | 2942460 - 2943236 | 29400.1 |
| glyoxylate carboligase | EQ825_14140 | Not Available | Negative | 2943249 - 2945030 | 64735.5 |
| hth-type transcriptional repressor allr | EQ825_14145 | Not Available | Negative | 2945120 - 2945935 | 29305.5 |
| ureidoglycolate lyase | EQ825_14150 | Not Available | Negative | 2946013 - 2946495 | 18223.6 |
| hth-type transcriptional activator alls | EQ825_14155 | Not Available | Positive | 2946725 - 2947651 | 34484.6 |
| trna 2-selenouridine(34) synthase mnmh | EQ825_14160 | Not Available | Positive | 2947720 - 2948814 | 41104.2 |
| hypothetical protein | EQ825_14170 | Not Available | Negative | 2949816 - 2950307 | 18411.2 |
| rhs repeat protein | EQ825_14175 | Not Available | Negative | 2950288 - 2952662 | 90440.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





