Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | EQ825_14075 | Not Available | Negative | 2927614 - 2928507 | 31674.1 |
| duf2877 domain-containing protein | EQ825_14080 | Not Available | Negative | 2928504 - 2929319 | 29583.8 |
| duf1116 domain-containing protein | EQ825_14085 | Not Available | Negative | 2929330 - 2930589 | 44980.6 |
| acyl-coa synthetase fdra | EQ825_14090 | Not Available | Negative | 2930599 - 2932266 | 58484.3 |
| ureidoglycolate dehydrogenase | EQ825_14095 | Not Available | Positive | 2932583 - 2933632 | 37893.2 |
| allantoate amidohydrolase | EQ825_14100 | Not Available | Positive | 2933654 - 2934889 | 45537.4 |
| (s)-ureidoglycine aminohydrolase | EQ825_14105 | Not Available | Positive | 2934900 - 2935685 | 28691.1 |
| glycerate 3-kinase | EQ825_14110 | Not Available | Negative | 2935913 - 2937058 | 38807.0 |
| uracil/xanthine transporter | EQ825_14115 | Not Available | Negative | 2937080 - 2938381 | 47268.3 |
| allantoinase allb | EQ825_14120 | Not Available | Negative | 2938438 - 2939799 | 49588.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





