Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain EC117 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1333875 bp
Thymine Count
1330962 bp
Guanine Count
1359319 bp
Cytosine Count
1378844 bp
Genome Length
5414605 bp
Protein-coding Genes
4929 genes
Non-Coding Genes
297 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system hok family toxin | EQ825_13910 | Not Available | Negative | 2892461 - 2892613 | 5620.13 |
| glutamate--cysteine ligase | EQ825_13920 | Not Available | Positive | 2893052 - 2894170 | 41679.6 |
| duf1158 domain-containing protein | EQ825_13925 | Not Available | Positive | 2894236 - 2894484 | 9434.09 |
| mmcq/yjbr family dna-binding protein | EQ825_13930 | Not Available | Positive | 2894549 - 2894917 | 13993.1 |
| oxygen-insensitive nad(p)h nitroreductase | EQ825_13935 | Not Available | Positive | 2895011 - 2895664 | 23860.3 |
| mechanosensitive ion channel family protein | EQ825_13940 | Not Available | Positive | 2895772 - 2897019 | 46619.5 |
| phenylalanine transporter | EQ825_13945 | Not Available | Negative | 2897087 - 2898463 | 50650.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | EQ825_13950 | Not Available | Negative | 2898565 - 2901708 | 114716.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | EQ825_13955 | Not Available | Negative | 2901720 - 2902943 | 44306.3 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | EQ825_13960 | Not Available | Negative | 2902959 - 2903291 | 12281.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





